Learn R Programming

Autoseed (version 0.1.0)

Retrieve Disease-Related Genes from Public Sources

Description

For researchers to quickly and comprehensively acquire disease genes, so as to understand the mechanism of disease, we developed this program to acquire disease-related genes. The data is integrated from three public databases. The three databases are 'eDGAR', 'DrugBank' and 'MalaCards'. The 'eDGAR' is a comprehensive database, containing data on the relationship between disease and genes. 'DrugBank' contains information on 13443 drugs and 5157 targets. 'MalaCards' integrates human disease information, including disease-related genes.

Copy Link

Version

Install

install.packages('Autoseed')

Monthly Downloads

263

Version

0.1.0

License

GPL (>= 3)

Maintainer

Jiawei Wu

Last Published

April 24th, 2020

Functions in Autoseed (0.1.0)

mala

The relationship between gene and disease
edgar_disease_gene

Get disease-related genes from eDGAR
malacards_disease_gene

Get disease-related genes from MalaCards
drugbank_disease_gene

Get disease-related genes from DrugBank.
AutoSeed

Get disease-related genes from eDGAR, DrugBank and MalaCards
drugbank

Relationship between gene and disease
edgar

Relationship between the gene and disease in edgar