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BALLI (version 0.2.0)

Expression RNA-Seq Data Analysis Based on Linear Mixed Model

Description

Analysis of gene expression RNA-seq data using Bartlett-Adjusted Likelihood-based LInear model (BALLI). Based on likelihood ratio test, it provides comparisons for effect of one or more variables. See Kyungtaek Park (2018) for more information.

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Version

Install

install.packages('BALLI')

Monthly Downloads

361

Version

0.2.0

License

GPL

Maintainer

Kyungtaek Park

Last Published

April 25th, 2019

Functions in BALLI (0.2.0)

Balli-class

Class Balli Class Balli holds results from BALLI
balli

BALLI
tecVarEstim

Technical Variance Estimation
TecVarList-class

Class TecVarList Class TecVarList holds technical variance
balliFit

balliFit
LargeDataObject-class

Class LargeDataObject Class LargeDataObject holds large data such as technical variance and results from BALLI fit