RJi_empty

This function updates the number of site level clusters for one patient level cluster via RJMCMC, when there is no patient in this cluster. Only used for <code>updateRJ</code> function.

Simultaneously clusters the Periodontal diseases (PD) patients
and their tooth sites after taking the patient- and site-level covariates into consideration.
'BAREB' uses the determinantal point process (DPP) prior to induce diversity
among different biclusters to facilitate parsimony and interpretability.
Essentially, 'BAREB' is a cluster-wise linear model based on Yuliang (2020) <doi:10.1002/sim.8536>.

Qingyang Liu

BAREB

A Bayesian Repulsive Biclustering Model for Periodontal Data

Yuliang Li

Yanxun Xu

Dipankar Bandyopadhyay

John Burkardt

RJi_empty function

<dl><dt>w</dt>
<dd>The weights for site level clusters. Should be a vector.</dd><dt>K</dt>
<dd>The number of site level cluster for the patient level cluster.</dd><dt>Gamma</dt>
<dd>The linear coefficients for site level covariates. Should be a matrix.</dd><dt>R</dt>
<dd>The current site level clustering membership</dd><dt>C</dt>
<dd>The DPP related kernel matrices. Should be an array of 3 dimensions</dd><dt>theta</dt>
<dd>The DPP hyper-parameter for site level</dd><dt>tau</dt>
<dd>A fixed DPP hyper-parameter, which we suggest high value, say 10^5</dd><dt>m</dt>
<dd>The number of sites</dd><dt>q</dt>
<dd>The number of site level covariates</dd><dt>hyper_delta</dt>
<dd>The hyper-parameter with default value being 1</dd></dl>

Arguments

Author

Function to update the number of site level clusters for one patient level cluster via RJMCMC, when there is no patient in this cluster — RJi_empty

<dl>

<dt>w</dt>
<dd>The weights for site level clusters. Should be a vector.</dd>

<dt>K</dt>
<dd>The number of site level cluster for the patient level cluster.</dd>

<dt>Gamma</dt>
<dd>The linear coefficients for site level covariates. Should be a matrix.</dd>

<dt>R</dt>
<dd>The current site level clustering membership</dd>

<dt>C</dt>
<dd>The DPP related kernel matrices. Should be an array of 3 dimensions</dd>

<dt>theta</dt>
<dd>The DPP hyper-parameter for site level</dd>

<dt>tau</dt>
<dd>A fixed DPP hyper-parameter, which we suggest high value, say 10^5</dd>

<dt>m</dt>
<dd>The number of sites</dd>

<dt>q</dt>
<dd>The number of site level covariates</dd>

<dt>hyper_delta</dt>
<dd>The hyper-parameter with default value being 1</dd>

</dl>

RJi_empty: Function to update the number of site level clusters for one patient level cluster via RJMCMC, when there is no patient in this cluster

Description

Usage

Value

Arguments

Author