IMGTtab2


Data from the Excel file 2 are named IMGT-gapped-nt-sequences and are included in IMGTtab2


datasets

Includes a set of functions to analyze for instance nucleotide frequencies as well as transition and  transversion. Can reconstruct germline sequences based on the international ImMunoGeneTics information system (IMGT/HighV-QUEST) outputs, calculate and plot the difference (%) of nucleotides at 6 positions around a mutation to identify and characterize hotspot motifs as well as calculate and plot average mutation frequencies of nucleotide mutations resulting in amino acid substitution.

Olena Ohlei

BCellMA

B Cell Receptor Somatic Hyper Mutation Analysis

IMGTtab2 function

A data frame with 9 rows and 18 variables

IMGTtab2: IMGT Table 2

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