BDgraph (version 2.6)

densplot: Plot of posterior distribution for graph size

Description

This function is for ploting the posterior distribution of all possible graphs according to number of their links.

Usage

densplot(output, xlim = NULL, ylim = NULL, main = NULL)

Arguments

output

a list which is the result of BD-MCMC algorithm from the 'bdgraph' function.

xlim

graphical parameter (see plot).

ylim

graphical parameter (see plot).

main

graphical parameter (see plot).

References

Mohammadi, A. and E. C. Wit (2012). Gaussian graphical model determination based on birth-death MCMC inference, arXiv:1210.5371v4. http://arxiv.org/abs/1210.5371v4

See Also

bdgraph

Examples

# generate the data from multivariate normal distribution
  data.sim <- bdgraph.sim(n = 100, p = 8, vis = T)
  
  output <- bdgraph(data.sim, meanzero = T, iter = 2000)
  
  densplot(output)