load.BGData

The name of the .RData file to be loaded.

file

The environment where to load the data.

envir

This function is similar to <code><a rd-options="base:load" href="/link/base%3A%3Aload()?package=BGData&version=2.1.0&to=base%3Aload" data-mini-rdoc="base:load::base::load()">base::load()</a></code>, but also initializes the
different types of objects that the <code>@geno</code> slot of a <a href="/link/?package=BGData&version=2.1.0" bgdata'="" data-mini-rdoc="BGData::"></a>'>BGData object
can take. Currently supported are <code>ff_matrix</code>,
<a rd-options="bigmemory:big.matrix-class" href="/link/bigmemory%3A%3Abig.matrix?package=BGData&version=2.1.0&to=bigmemory%3Abig.matrix-class" data-mini-rdoc="bigmemory:big.matrix-class::bigmemory::big.matrix">bigmemory::big.matrix</a>, and <a rd-options="BEDMatrix:BEDMatrix-class" href="/link/BEDMatrix%3A%3ABEDMatrix?package=BGData&version=2.1.0&to=BEDMatrix%3ABEDMatrix-class" data-mini-rdoc="BEDMatrix:BEDMatrix-class::BEDMatrix::BEDMatrix">BEDMatrix::BEDMatrix</a> objects. If
the object is of type <a rd-options="LinkedMatrix:LinkedMatrix-class" href="/link/LinkedMatrix%3A%3ALinkedMatrix?package=BGData&version=2.1.0&to=LinkedMatrix%3ALinkedMatrix-class" data-mini-rdoc="LinkedMatrix:LinkedMatrix-class::LinkedMatrix::LinkedMatrix">LinkedMatrix::LinkedMatrix</a>, all nodes will be
initialized with their appropriate method.

An umbrella package providing a phenotype/genotype data structure
and scalable and efficient computational methods for large genomic datasets
in combination with several other packages: 'BEDMatrix', 'LinkedMatrix',
and 'symDMatrix'.

Alexander Grueneberg

BGData

A Suite of Packages for Analysis of Big Genomic Data

Gustavo de los Campos

Paulino Perez

Ana Vazquez

load.BGData function

This function is similar to <code><a rd-options='base:load' href='base::load()'>base::load()</a></code>, but also initializes the
different types of objects that the <code>@geno</code> slot of a <a href='<a href='BGData'></a>'>BGData</a> object
can take. Currently supported are <code>ff_matrix</code>,
<a rd-options='bigmemory:big.matrix-class' href='bigmemory::big.matrix'>bigmemory::big.matrix</a>, and <a rd-options='BEDMatrix:BEDMatrix-class' href='BEDMatrix::BEDMatrix'>BEDMatrix::BEDMatrix</a> objects. If
the object is of type <a rd-options='LinkedMatrix:LinkedMatrix-class' href='LinkedMatrix::LinkedMatrix'>LinkedMatrix::LinkedMatrix</a>, all nodes will be
initialized with their appropriate method.

load.BGData: Loads BGData (and Other) Objects from .RData Files.

Description

Usage

Arguments