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BGLR (version 1.1.1)

Bayesian Generalized Linear Regression

Description

Bayesian Generalized Linear Regression.

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Version

Install

install.packages('BGLR')

Monthly Downloads

2,227

Version

1.1.1

License

GPL-3

Maintainer

Paulino Rodriguez

Last Published

December 9th, 2023

Functions in BGLR (1.1.1)

mice.X

Molecular markers
wheat

wheat dataset
wheat.X

Molecular markers
wheat.A

Pedigree info for the wheat dataset
vech

Extract Lower Triangular Elements from a Symmetric Matrix
write_bed

write_bed
wheat.Y

Grain yield
xpnd

Expand a Vector into a Symmetric Matrix
wheat.sets

Sets for cross validation (CV)
summary.BGLR

summary for BGLR fitted models
simulated3t

simulated data for 3 traits
simulated3t.pheno

Phenotypical data for simulated dataset with 3 traits
mice.map

Genetic map info for the mice dataset
simulated3t.X

Molecular markers
BFDR

BFDR
BLRXy

Bayesian Linear Regression
getGCovar

getGCovar
predict.BGLR

Model Predictions
read_ped

read_ped
read_bed

read_bed
mice

mice dataset
getVariances

getVariances
BGLR

Bayesian Generalized Linear Regression
BLRCross

Bayesian Linear Regression
Multitrait

Multi trait models
mice.A

Pedigree info for the mice dataset
plot.BGLR

Plots for BGLR Analysis
mice.pheno

Phenotypical data for the mice dataset
readBinMatMultitrait

readBinMatMultitrait
BLR

Bayesian Linear Regression
readBinMat

readBinMat
residuals.BGLR

Extracts models residuals