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BHC (version 1.24.0)

Bayesian Hierarchical Clustering

Description

The method performs bottom-up hierarchical clustering, using a Dirichlet Process (infinite mixture) to model uncertainty in the data and Bayesian model selection to decide at each step which clusters to merge. This avoids several limitations of traditional methods, for example how many clusters there should be and how to choose a principled distance metric. This implementation accepts multinomial (i.e. discrete, with 2+ categories) or time-series data. This version also includes a randomised algorithm which is more efficient for larger data sets.

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Version

Version

1.24.0

License

GPL-3

Maintainer

Rich Savage

Last Published

February 15th, 2017

Functions in BHC (1.24.0)

bhc

Function to perform Bayesian Hierarchical Clustering on a 2D array of discretised (i.e. multinomial) data