BHMSMAfMRI (version 2.3)

substituteWaveletCoef: Substitute 2D wavelet transform coefficients with user-given values

Description

substituteWaveletCoef substitutes the wavelet coefficients stored wavelet object generated through 2D wavelet transform with user-given values and returns the modified wavelet object.

Usage

substituteWaveletCoef(grid, waveletobj, values)

Value

A wavelet object of class imwd.object with updated wavelet coefficients.

Arguments

grid

The number of voxels in one row (or, one column) of the brain slice of interest. Must be a power of 2. The total number of voxels is grid^2. The maximum value of grid for this package is 512.

waveletobj

A wavelet object of class imwd.object, usually obtained by performing 2D wavelet transformion through the function imwd of package wavethresh.

values

The values with which the wavelet coefficients are to be replaced. The order should be consistent with imwd.object class.

Author

Nilotpal Sanyal, Marco Ferreira

Maintainer: Nilotpal Sanyal <[e-mail]>

Details

The maximum value of grid for this package is 512.

See Also

imwd

Examples

set.seed(1)
n <- 3
grid <- 8
ntime <- 10
designmat <- cbind( rep(1,10), c(rep(c(1,0),5)) )
data <- array(dim=c(n,grid,grid,ntime),
  rnorm(n*grid*grid*ntime))
glm.fit <- glmcoef(n, grid, data, designmat)
glmcoefstd <- glm.fit$GLMCoefStandardized[,,,1]
dwt = wavethresh::imwd(glmcoefstd[1,,],type="wavelet",
  family="DaubLeAsymm",filter.number=6,bc="periodic")
dwt

values = rnorm(grid^2-1)
dwtnew = substituteWaveletCoef(grid,dwt,values)
dwtnew