Extract a list of all species in the BIEN database.
BIEN_metadata_database_version
Download the current BIEN database version and release date
Extract occurrence data from BIEN for specified genera
BIEN_occurrence_records_per_species
Count the number of (geoValid) occurrence records for each species in BIEN
Extract species occurrence records by a latitude/longitude bounding box.
Extract occurrence data for specified sf polygon
Extract occurrence data for specified species from BIEN
Extract species occurrences by family.
Extract species occurrence records by county.
Extract species occurrence records by country.
Download the complete BIEN phylogenies
Extract species occurrence records by state.
Download plot data from a given datasource.
BIEN_phylogeny_conservative
Download the conservative BIEN phylogeny
BIEN_phylogeny_label_nodes
Label nodes on a phylogeny
BIEN_plot_list_sampling_protocols
List available sampling protocols.
Download plot metadata
BIEN_plot_list_datasource
List available datasources.
BIEN_ranges_shapefile_to_skinny
Extract range data and convert to smaller "skinny" format
Download plot data from specified sf object.
Download plot data from specified states/provinces.
BIEN_ranges_intersect_species
Download range maps that intersect the range of a given species.
Download plot data by plot name.
Download plot data from specified countries.
BIEN_plot_sampling_protocol
Download plot data using a specified sampling protocol.
Download plot data by dataset.
Download range maps that intersect a specified bounding box.
BIEN_ranges_skinny_ranges_to_richness_raster
Build a richness raster from a skinny range file
Extract stem data for specified genera from BIEN
Extract stem data for specified families from BIEN
Extract stem data for a given datasource from BIEN
Download range maps for given genus.
List available range maps
BIEN_stem_sampling_protocol
Download stem data using a specified sampling protocol.
Calculates species mean values for a given trait, using Genus or Family level data where Species level data is lacking.
Extract taxonomic information for genera
Extract stem data for specified species from BIEN
Load range maps for specified species.
Download trait data for given genera.
Download trait data for given species.
Set query details
Download range maps for given species.
Download range maps that intersect a user-supplied sf object.
Extract range data for large numbers of species
Download trait data for given genus/genera and trait(s).
Download all measurements of a specific trait(s).
Extract taxonomic information for families
List all available types of trait data
Check that value is character
Set query details
Download trait data for given families and traits.
Set query details
BIEN_trait_traits_per_species
Count the number of trait observations for each species in the BIEN database
Run an SQL query on the BIEN database.
Set query details
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BIEN_trait_traitbyspecies
Download trait data for given species and trait.
Set query details
Download trait data for given country.
Extract taxonomic information for species
Download trait data for given families.
Set query details
Set query details
Check that value is logical
Set query details
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Check that value is logical or null
Set query details
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Check that value is numeric
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BIEN_metadata_list_political_names
List political divisions and associated geonames codes.
BIEN: Tools for accessing the BIEN database.
Extract species list by country
Extract a species list by state/province
Extract a list of species within a given sf polygon.
Check for differing records between old and new dataframes.
Generate citations for data extracted from BIEN.
Extract a species list by county.