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BLOQ (version 0.1-1)

Impute and Analyze Data with BLOQ Observations

Description

It includes estimating the area under the concentrations versus time curve (AUC) and its standard error for data with Below the Limit of Quantification (BLOQ) observations. Two approaches are implemented: direct estimation using censored maximum likelihood, also by first imputing the BLOQ's using various methods, then compute AUC and its standard error using imputed data. Technical details can found in Barnett, Helen Yvette, Helena Geys, Tom Jacobs, and Thomas Jaki. "Methods for Non-Compartmental Pharmacokinetic Analysis With Observations Below the Limit of Quantification." Statistics in Biopharmaceutical Research (2020): 1-12. (available online: ).

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Version

Install

install.packages('BLOQ')

Monthly Downloads

594

Version

0.1-1

License

GPL (>= 2)

Maintainer

Vahid Nassiri

Last Published

June 7th, 2020

Functions in BLOQ (0.1-1)

imputeROS

imputing BLOQ's using regression on order statistics
simulateBealModelMixedEffects

simulate data from Beal model with fixed and random effects
simulateBealModelFixedEffects

simulate data from Beal model with fixed effects
imputeBLOQ

impute BLOQ's with various methods
estimateAUCwithPairwiseCML

estimate AUCwith pairwise censored maximum likelihood
imputeKernelDensityEstimation

imputing BLOQ's using kernel density estimation
imputeCML

imputing BLOQ's using censored maximum likelihood
imputeConstant

imputing BLOQ's with a constant value
estimateAUCandStdErr

Estimate AUC and its standard error
estimateAUCwithCMLperTimePoint

estimate AUC with censored maximum likelihood per time point
estimateAUCwithFullCML

estimate AUC with Full censored maximum likelihood
estimateAUCwithMVNCML

estimate AUC with multivariate normal censored maximum likelihood