samplesCoda: Writing files in CODA format
Description
This function writes files in CODA format to be processed or imported, e.g, by some other software.Usage
samplesCoda(node, stem, beg = samplesGetBeg(),
end = samplesGetEnd(), firstChain = samplesGetFirstChain(),
lastChain = samplesGetLastChain(), thin = samplesGetThin())Arguments
node
Character vector of length 1, name of a variable in the model.
stem
The filestem of the CODA files to be generated. See details.
beg, end
Arguments to select a slice of monitored values corresponding to iterations beg:end.
firstChain, lastChain
Arguments to select a sub group of chains.
thin
to only use every thin-th value of the stored sample.
Value
- Prints CODA files written.
Details
Example for argument stem:
If stem = "c:/myFolder/foo", the resulting files
are called fooCODAchain1.txt, ..., fooCODAchainN.txt, and
fooCODAindex.txt. They are written into the tempdir()
and copied to the path "c:/myFolder".
If the variable of interest is an array, slices of the array can be selected using the notation
variable[lower0:upper0, lower1:upper1, ...].
If the arguments are left at their defaults the whole sample for all chains will be used for output.