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BasicSTARRseq (version 1.0.2)

Basic peak calling on STARR-seq data

Description

Basic peak calling on STARR-seq data based on a method introduced in "Genome-Wide Quantitative Enhancer Activity Maps Identified by STARR-seq" Arnold et al. Science. 2013 Mar 1;339(6123):1074-7. doi: 10.1126/science. 1232542. Epub 2013 Jan 17.

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Version

Version

1.0.2

License

LGPL-3

Maintainer

Annika Buerger

Last Published

February 15th, 2017

Functions in BasicSTARRseq (1.0.2)

STARRseqData-class

Class "STARRseqData"
getPeaks

Peak calling on STARR-seq data