plot.bMap.cifti

Implements Bayesian brain mapping models, including the prior
ICA (independent components analysis) model proposed in Mejia et al. (2020)
<doi:10.1080/01621459.2019.1679638> and the spatial prior ICA model
proposed in proposed in Mejia et al. (2022)
<doi:10.1080/10618600.2022.2104289>. Both models estimate subject-level
brain as deviations from known population-level networks, which are
estimated using standard ICA algorithms. Both models employ an
expectation-maximization algorithm for estimation of the latent brain
networks and unknown model parameters. Includes direct support for 'CIFTI',
'GIFTI', and 'NIFTI' neuroimaging file formats.

Amanda Mejia

BayesBrainMap

Estimate Brain Networks and Connectivity with Population-Derived
Priors

Damon Pham

Daniel Spencer

Mary Beth Nebel

plot.bMap.cifti function

<dl><dt>x</dt>
<dd>The result of <code>BrainMap</code> with CIFTI data</dd>
<dt>stat</dt>
<dd><code>"mean"</code> (default) or <code>"se"</code>.</dd>
<dt>maps</dt>
<dd>Show the BrianMap estimates on the brain? Default: <code>TRUE</code>.</dd>
<dt>FC</dt>
<dd>Show the FC estimates? Default: <code>TRUE</code>. Note that only the
mean estimate is available for FC, not the SE.</dd>
<dt>...</dt>
<dd>Additional arguments to <code>view_xifti</code></dd></dl>

Arguments

Plot BrainMap estiamte — plot.bMap.cifti

<dl>

<dt>x</dt>
<dd>The result of <code>BrainMap</code> with CIFTI data</dd>


<dt>stat</dt>
<dd><code>"mean"</code> (default) or <code>"se"</code>.</dd>


<dt>maps</dt>
<dd>Show the BrianMap estimates on the brain? Default: <code>TRUE</code>.</dd>


<dt>FC</dt>
<dd>Show the FC estimates? Default: <code>TRUE</code>. Note that only the
mean estimate is available for FC, not the SE.</dd>


<dt>...</dt>
<dd>Additional arguments to <code>view_xifti</code></dd>

</dl>

plot.bMap.cifti: Plot BrainMap estiamte

Description

Usage

Value

Arguments