BayesSIM (version 1.0.0)

getInit: Get Initial Value of the Model

Description

Functions for getting list of initial values of the nimble model.

Usage

getInit(object)

Value

BUGS code of the model definition.

Arguments

object

A fitted object of BayesSIM, BayesSIM_setup or individual model.

Details

The list of initial values are returned. This can be helpful to use when you use BayesSIM_setup. You should be aware of that if you want to get more than 1 chain of MCMC samples, you should change nchain argument in BayesSIM_setup. The output of initial values would be different, depending on the number of chain.

You can apply BayesSIM object when you want to check the list of initial values.

Examples

# \donttest{
simdata2 <- data.frame(DATA1$X, y = DATA1$y)


# Split version
models <- BayesSIM_setup(y ~ ., data = simdata2)
Ccompile <- compileModelAndMCMC(models)
nimSampler <- get_sampler(Ccompile)
initList <- getInit(models)
mcmc.out <- runMCMC(nimSampler, niter = 5000, nburnin = 1000, thin = 1,
                    nchains = 1, setSeed = TRUE, inits = initList,
                    summary = TRUE, samplesAsCodaMCMC = TRUE)

# "fit_split" becomes exactly the same as the class of "fit_one" object and apply generic functions.
fit_split <- as_bsim(models, mcmc.out)

# }