updateGroups

MCMC chain including only the parameters (not logP,ll, logP)

chain

blockSettings

Determine the groups of correlated parameters

General-purpose MCMC and SMC samplers, as well as plot and diagnostic functions for Bayesian statistics, with a particular focus on calibrating complex system models. Implemented samplers include various Metropolis MCMC variants (including adaptive and/or delayed rejection MH), the T-walk, two differential evolution MCMCs, two DREAM MCMCs, and a sequential Monte Carlo (SMC) particle filter.

updateGroups: Determine the groups of correlated parameters

Description

Usage

Arguments

Value