profileAll

dset

indexed genes(rows) obtained from <code><a href="/link/indexedBic?package=BcDiag&version=1.0.2" rd-options="" data-mini-rdoc="BcDiag::indexedBic">indexedBic</a></code>

indg

indexed conditions(columns) obtained from <code><a href="/link/indexedBic?package=BcDiag&version=1.0.2" rd-options="" data-mini-rdoc="BcDiag::indexedBic">indexedBic</a></code>

indc

group genes(rows)/conditions(columns) as '1' for biclusterd or '2' out side biclusterd

numerical value to rotate the 3D; 0,90,180,..

teta

Supportive function for profile.bic used to plot all profile plots in single frame for biclusterd and clusterd data.

This package provides Diagnostic tools based on two way
        anova and median polish residual plots for Bicluster output
        obtained from packages; "biclust" by Kaiser et al.(2008),"isa2"
        by Csardi et al. (2010) and "fabia" by Hochreiter et al.
        (2010). Moreover, It provides visualization tools for bicluster
        output and corresponding non bicluster rows or columns
        outcomes.  It has also extended the idea of Kaiser et al.(2008)
        which is, extracting bicluster output in a text format, by
        adding by adding two bicluster methods from fabia and isa2 r
        packages.

profileAll: The profileAll function

Description

Usage

Arguments

Value

Details

See Also