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BcDiag (version 1.0.6)

Diagnostics plots for Bicluster Data

Description

This package provides Diagnostic tools based on two way anova and median polish residual plots for Bicluster output obtained from packages; "biclust" by Kaiser et al.(2008),"isa2" by Csardi et al. (2010) and "fabia" by Hochreiter et al. (2010). Moreover, It provides visualization tools for bicluster output and corresponding non bicluster rows or columns outcomes. It has also extended the idea of Kaiser et al.(2008) which is, extracting bicluster output in a text format, by adding by adding two bicluster methods from fabia and isa2 r packages.

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Version

Install

install.packages('BcDiag')

Monthly Downloads

126

Version

1.0.6

License

GPL-3

Maintainer

Ewoud Troyer

Last Published

December 2nd, 2014

Functions in BcDiag (1.0.6)

anomedOnlybic

The anomedOnlybic function
exploreOnlybic

The exploreOnlybic function
BcDiag-package

The BCDiag package
breastc

Gene Expression Data Example
writeBic

The writeBic function
exploreBic

The exploreBic function
dlbcl

Gene Expression Data Example
profileBic

The profileBic function.