extract_prob_association

Object of class <code>BeviMed</code>.

Logical value determining whether to return probabilities broken down by mode of inheritance.

by_model

Get posterior probability of association as numeric value, or optionally as numeric vector of length two with probabilities broken down by mode of inheritance (by passing <code>by_model=TRUE</code>), from a <code>BeviMed</code> object.

A fast integrative genetic association test for rare diseases based on a model for disease status given allele counts at rare variant sites. Probability of association, mode of inheritance and probability of pathogenicity for individual variants are all inferred in a Bayesian framework - 'A Fast Association Test for Identifying Pathogenic Variants Involved in Rare Diseases', Greene et al 2017 <doi:10.1016/j.ajhg.2017.05.015>.

extract_prob_association: Extract the posterior probability of association

Description

Usage

Arguments

Value

See Also