sum_ML_over_PP

Numeric matrix of log probabilities of <code>y</code> at different temperatures (columns) in different iterations (rows).

y_log_lik_t_equals_1_traces

Numeric vector of temperatures used to produce <code>y_log_lik_t_equals_1_traces</code>.

temperatures

Calculate the Marginal Likelihood by summation over power posterior likelihood exptectances

A fast integrative genetic association test for rare diseases based on a model for disease status given allele counts at rare variant sites. Probability of association, mode of inheritance and probability of pathogenicity for individual variants are all inferred in a Bayesian framework - 'A Fast Association Test for Identifying Pathogenic Variants Involved in Rare Diseases', Greene et al 2017 <doi:10.1016/j.ajhg.2017.05.015>.

sum_ML_over_PP: Calculate marginal likelihood from power posteriors output

Description

Usage

Arguments

Value