log_BF

Logical vector of case (<code>TRUE</code>) control (<code>FALSE</code>) status.

Beta shape hyper-priors for prior on rate of case labels.

tau0_shape

Arguments to pass to <code><a rd-options="" href="/link/bevimed_m?package=BeviMed&version=5.8" data-mini-rdoc="BeviMed::bevimed_m">bevimed_m</a></code>.

Compute log Bayes factor of an association model and model gamma = 0.

A fast integrative genetic association test for rare diseases based on a model for disease status given allele counts at rare variant sites. Probability of association, mode of inheritance and probability of pathogenicity for individual variants are all inferred in a Bayesian framework - 'A Fast Association Test for Identifying Pathogenic Variants Involved in Rare Diseases', Greene et al 2017 <doi:10.1016/j.ajhg.2017.05.015>.

Daniel Greene

BeviMed

Bayesian Evaluation of Variant Involvement in Mendelian Disease

log_BF function

Arguments to pass to <code><a rd-options='' href='bevimed_m'>bevimed_m</a></code>.

log_BF: Calculate log Bayes factor between an association model with a given mode of inheritance and model gamma = 0

Description

Usage

Arguments

Value

See Also