BioInstaller (version 0.3.7)

crawl.all.versions: A function can be used to craw all source code from nongithub.cfg stored information

Description

A function can be used to craw all source code from nongithub.cfg stored information

Usage

crawl.all.versions(name, download.dir = "./",
  nongithub.cfg = c(system.file("extdata",
  "config/nongithub/nongithub.toml", package = "BioInstaller"),
  system.file("extdata", "config/db/db_main.toml", package =
  "BioInstaller"), system.file("extdata", "config/db/db_annovar.toml",
  package = "BioInstaller"), system.file("extdata",
  "config/db/db_blast.toml", package = "BioInstaller")),
  parse.extra.params = list(extra.list = list(), rcmd.parse = TRUE,
  bash.parse = TRUE, glue.parse = TRUE), license = "")

Arguments

name

Software name

download.dir

Download destdir

nongithub.cfg

Configuration file of installed by non github url, default is system.file('extdata', 'config/nongithub/nongithub.toml', package='BioInstaller')

parse.extra.params

Other parameters pass to parse.extra

license

The BioInstaller download license code.

Examples

# NOT RUN {
crawl.all.versions('demo')
# }