BioMedR (version 1.2.1)

extrProtAAC: Amino Acid Composition Descriptor

Description

Amino Acid Composition Descriptor

Usage

extrProtAAC(x)

Arguments

x

A character vector, as the input protein sequence.

Value

A length 20 named vector

Details

This function calculates the Amino Acid Composition descriptor (Dim: 20).

References

M. Bhasin, G. P. S. Raghava. Classification of Nuclear Receptors Based on Amino Acid Composition and Dipeptide Composition. Journal of Biological Chemistry, 2004, 279, 23262.

See Also

See extrProtDC and extrProtTC for Dipeptide Composition and Tripeptide Composition descriptors.

Examples

# NOT RUN {
x = readFASTA(system.file('protseq/P00750.fasta', package = 'BioMedR'))[[1]]
extrProtAAC(x)

# }