largestComp

A graph in <em>graphNEL</em> or <em>igraph</em> format.

network


The function extracts the largest component of a network.


This package provides functions for the integrated
analysis of protein-protein interaction networks and the
detection of functional modules. Different datasets can be
integrated into the network by assigning p-values of
statistical tests to the nodes of the network. E.g. p-values
obtained from the differential expression of the genes from an
Affymetrix array are assigned to the nodes of the network. By
fitting a beta-uniform mixture model and calculating scores
from the p-values, overall scores of network regions can be
calculated and an integer linear programming algorithm
identifies the maximum scoring subnetwork.

largestComp: Extract largest component of network

Description

Usage

Arguments

Value

Examples