scoreOffset


Model from the beta-uniform mixture fitting.


fdr1

fdr2


Function to change score offset from FDR1 to FDR2.


This package provides functions for the integrated
analysis of protein-protein interaction networks and the
detection of functional modules. Different datasets can be
integrated into the network by assigning p-values of
statistical tests to the nodes of the network. E.g. p-values
obtained from the differential expression of the genes from an
Affymetrix array are assigned to the nodes of the network. By
fitting a beta-uniform mixture model and calculating scores
from the p-values, overall scores of network regions can be
calculated and an integer linear programming algorithm
identifies the maximum scoring subnetwork.

Marcus Dittrich

BioNet

Routines for the functional analysis of biological networks

scoreOffset function

Model from the beta-uniform mixture fitting.

Function to change score offset from FDR1 to FDR2.

scoreOffset: Change score offset for 2 FDRs

Description

Usage

Arguments

Value

See Also

Examples