read_thermal_raw

Reads a binary .raw file (typically 32-bit floating point), converts it into a matrix,
 and constructs a 'BioThermR' object containing raw data and metadata.

A modular framework for standardized analysis of thermal imaging data in
animal experimentation. The package integrates thermographic data import
(FLIR, raw, CSV), automated region of interest (ROI) segmentation based on
'EBImage' (Pau et al., 2010 <doi:10.1093/bioinformatics/btq046>), interactive
ROI refinement, and high-throughput batch processing.

BeiHao Li

BioThermR

Standardized Processing and Analysis of Thermal Imaging Data in
Animal Studies

read_thermal_raw function

<dl><dt>file_path</dt>
<dd>String. The full path to the .raw file.</dd>
<dt>width</dt>
<dd>Integer. The width of the thermal sensor (number of columns). Default is 160.</dd>
<dt>height</dt>
<dd>Integer. The height of the thermal sensor (number of rows). Default is 120.</dd>
<dt>rotate</dt>
<dd>Logical. Whether to rotate the image 90 degrees counter-clockwise.
Default is TRUE (corrects orientation for many standard sensor exports).</dd></dl>

Arguments

Read a Single .raw Thermal Image File — read_thermal_raw

<dl>

<dt>file_path</dt>
<dd>String. The full path to the .raw file.</dd>


<dt>width</dt>
<dd>Integer. The width of the thermal sensor (number of columns). Default is 160.</dd>


<dt>height</dt>
<dd>Integer. The height of the thermal sensor (number of rows). Default is 120.</dd>


<dt>rotate</dt>
<dd>Logical. Whether to rotate the image 90 degrees counter-clockwise.
Default is TRUE (corrects orientation for many standard sensor exports).</dd>

</dl>

read_thermal_raw: Read a Single .raw Thermal Image File

Description

Usage

Value

Arguments

Examples