BioVizSeq (version 1.0.0)

gff_plot: gff_plot

Description

Visualization of element in gff or gtf file

Usage

gff_plot(
  gff_file,
  the_order = NULL,
  shape = "Rect",
  r = 0.3,
  legend_size = 15,
  element_color = NULL
)

Value

p

Arguments

gff_file

The path of gff file.

the_order

The path of order of mRNA. It is also the mRNA you want to showcase. A List of Gene ID , One ID Per Line.

shape

RoundRect or Rect.

r

The radius of rounded corners.

legend_size

The size of legend.

element_color

The color set of element.

Author

Shiqi Zhao

Examples

gff_path <- system.file("extdata", "test.gff", package = "BioVizSeq")
gff_plot(gff_path)