BioVizSeq (version 1.0.0)

motif_seq: motif_seq

Description

Get motif sequence from meme file or mast file

Usage

motif_seq(meme_file)

Value

data.frame

Arguments

meme_file

The path of meme file or mast file.

Author

Shiqi Zhao

Examples

meme_path <- system.file("extdata", "meme.xml", package = "BioVizSeq")
meme_file <- readLines(meme_path)
motifseq<- motif_seq(meme_file)

mast_path <- system.file("extdata", "mast.xml", package = "BioVizSeq")
mast_file <- readLines(mast_path)
motifseq<- motif_seq(mast_file)