snpCall

Get and retrieve SNP call and call probability data.

These generic functions access the calls and call probabilities stored in objects.

Keywords
manip
Usage
snpCall(object, ...) snpCall(object, ...) <- value snpCallProbability(object, ...) snpCallProbability(object, ...) <- value
Arguments
object
Object, possibly derived from class SnpSet.
value
Matrix with rows representing SNP calls or call probabilities and columns samples.
...
Additional arguments available to methods.
Value

snpCall returns a matrix of SNP calls; snpCallProbability returns the corresponding matrix of standard errors, when available.

See Also

SnpSet-class

Aliases
  • snpCall
  • snpCall<-
  • snpCallProbability
  • snpCallProbability<-
Documentation reproduced from package Biobase, version 2.26.0, License: Artistic-2.0

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