Biobase (version 2.32.0)

snpCall: Get and retrieve SNP call and call probability data.

Description

These generic functions access the calls and call probabilities stored in objects.

Usage

snpCall(object, ...) snpCall(object, ...) <- value snpCallProbability(object, ...) snpCallProbability(object, ...) <- value

Arguments

object
Object, possibly derived from class SnpSet.
value
Matrix with rows representing SNP calls or call probabilities and columns samples.
...
Additional arguments available to methods.

Value

snpCall returns a matrix of SNP calls; snpCallProbability returns the corresponding matrix of standard errors, when available.

See Also

SnpSet-class