| add_data_experiment_permisions |
Helper function to Add Data Experiment Permissions |
| add_packages |
Add packages to SVN |
| bioc_views_classification |
Extract and validiate biocViews terms from tarball |
| as.issue |
Coerce to an issue object |
| clean_data_package |
Clean and copy a Data Experiment package |
| read_permissions |
Read authz permission file |
| write_permissions |
Write authz permission file |
| devteam |
Members of the devteam |
| users |
Retrieve the user list |
| assign_new_packages |
Assign new packages |
| tracker_login |
Login to the issue tracker |
| tabulate_activity |
Tabulate tracker activity |
| issue |
Retrieve all of the messages from an issue |
| post |
Post a message to an issue |
| clean |
Convenience functions for managing behind the scenes operations
involved in adding packages to Bioconductor Repositories. |
| request_credentials |
Request new credentials for users |
| svn |
Declare an SVN instance |
| svn_auth_text |
Generate text to copy / paste into svn file Bioconductor.authz |
| standard_commit_message |
Generate a standard commit message for permission edits |
| accept_package |
Accept a package on the tracker |
| maintainers |
Retrieve the maintainers from a tarball |
| emailMaintainer |
Email a new user their credentials |
| add_software_permisions |
Helper function to Add Software Permissions |
| user_db |
Retrieve the remote user database |
| match_user |
See if a person already exists in the user db |
| proj_path |
Path to file (in the unix sense) within the project |
| edit_software_permissions |
Edit the software permissions |
| email |
Extract the email from an object |
| package_name |
Extract a packages name from a tarball |
| tracker_search |
Query the issue tracker |
| the |
storage object |
| workflow_standard |
Workflow steps |
| assign_packages |
Assign a specific package |
| download |
Download attachments from an issue |
| status_map |
Status code to name mapping |
| package_assignment_email |
Generate the package assignments email given code to run |
| edit_data_experiment_permissions |
Edit the data experiment permissions |
| run_commands |
Run commands on a file, possibly remote. |
| add_to_spreadsheet |
Add packages to the tracking worksheet |
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