This package provides tools for managing Bioconductor and other packages in a manner consistent with Bioconductor's package versioning and release system.
Main functions are as follows; additional help is
available for each function, e.g., ?BiocManager::version
.
BiocManager::install()
Install or update packages from Bioconductor, CRAN, and GitHub.
BiocManager::version()
Report the version of Bioconductor in use.
BiocManager::available()
Return a character()
vector
of package names available (at BiocManager::repositories()
)
for installation.
BiocManager::valid()
Determine whether installed packages are from the same version of Bioconductor.
BiocManager::repositories()
Bioconductor and other repository URLs to discover packages for installation.
Useful links:
Report bugs at https://github.com/Bioconductor/BiocManager/issues