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Biodem (version 0.5)

Biodemography Functions

Description

The Biodem package provides a number of functions for Biodemographic analysis.

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Version

Install

install.packages('Biodem')

Monthly Downloads

221

Version

0.5

License

GPL-2

Maintainer

Federico Calboli

Last Published

January 5th, 2021

Functions in Biodem (0.5)

S

Systematic pressure matrix
sur.inbr

Total, Random and Non-random Inbreeding Coefficients
surnames

Surname frequency table
sur.freq

Calculates surnames frequency tables
rri

Calculates an unbiased estimate of Regional Random Isonymy
rel.phi

Calculates an 'a priori' kinship matrix from isonymy data
rel.cond

Calculates a conditional kinship matrix from isonymy data
mtx.exp

Calculates the n-th power of a matrix
mar.iso

Observed and Random Marital Isonymy
sym.P

Calculate the symmetric column stochastic matrix
uri

Calculates the Unbiased Random Isonymy matrix
raw.mig

A raw migration data
r.pairs

Observed and Random Repeated Pairs Coefficients
valley

Raw marriage data
col.sto

Turns a Migration Matrix into a Column Stochastic Matrix
P

Column stochastic migration matrix
mal.phi

Calculates a kinship matrix using the Malecot Migration Model
lasker

Calculates the lasker kinship coeffcient
Fst

Calculates the Fst from the conditional kinship matrix
hedrick

Calculates the Hedrick standardized kinship coefficient
mal.eq

Calculates the asymptotic generation for the Malecot model
mal.cond

Calculates a Conditional Kinship matrix
N

Effective population vector