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Biograph (version 1.0)

Explore life histories

Description

Extracts from the data useful information on the life courses of selected individuals or subpopulations with given attributes.

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Version

Install

install.packages('Biograph')

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Version

1.0

License

GPL-2

Maintainer

Frans Willekens

Last Published

January 26th, 2011

Functions in Biograph (1.0)

Lexispoints

Plot observations in Lexis diagram

OverviewTransitions

Overview of transitions

p.rates

Print transition rates

Biograph.mvna

Biograph object to input data for mvna package

p.OverviewEpisodes

Overview of episodes

p.SamplePath

Print samplepath for selected subjects

Rates

Estimate occurrence-exposure rates

CMC.ages

From CMC to age

Biograph.msm

Biograph to msm format

Biograph.mstate

Biograph to mstate object of class "msdata"

Biograph.long

Converts Biograph object to long format

MSLT

Multistate life table: survival function and exposure function

RateTable

Table for rate calculation

p.table

Print a table

trans.GLHS

Creates transition matrix for illness-death model for GLHS data

AgeTrans

Ages at transition

Cumrates

Estimates and plots cumulative transition rates

Parameters

Life history parameters from data

string.blank.omit

Remove blanks in character string

CMC.years

CMC at transition to year of transition

LexisOccExp

Display occurrence, exposures and transition rates in a Lexis diagram

StateSpace

Get state space

Occup

State occupancies and sojourn times

stringf

Stringf

Lexislines.episodes

Draw Lexis diagram with lifelines for selected subjects

GLHS.Biograph

Biograph object from Blossfeld-Rohwer data rrdat.1

Plot state occupancies by age

locpath

Location of path in Biograph object

Remove.intrastate

Remove intrastate transitions from Biograph object

p.Trans

Prints transitions

rrdat

The Blossfeld-Rohwer subsample of the German Life History Survey (GLHS)

pos.char

Position of a character in a string variable (first match)

Sequences

List of sequences

statesequence.ind

Individual trajectories

Biograph-package

Explore biograpies / life histories / lifepaths

NLOG98

NLOG98 Netherlands Family and Fertility Survey 1998

YearTrans

Years at transition

IllnessDeath.GLHS

Illness-death model for job transitions

ChangeObservationWindow.t

Change observation window to period between two points in time

TransitionAB

Age profile of selected transition

ChangeObservationWindow.e

Change observation window to period between two transitions CHECK