CorTri

Data frame or matrix. Column vectors are correlated

Character string. Name of method passed to cor. 
Pearson by default.

method

This function runs correlation between markers of a data frame or matrix, 
returning the values of the lower/upper triangular of the correlation matrix
in a vector.

Provides tools to accurately estimate cell type abundances
from heterogeneous bulk expression. A reference-based method utilizes
single-cell information to generate a signature matrix and transformation
of bulk expression for accurate regression based estimates. A marker-based
method utilizes known cell-specific marker genes to measure relative
abundances across samples.
For more details, see Jew and Alvarez et al (2019) <doi:10.1101/669911>.

Brandon Jew

CorTri: Correlate columns of data frame

Description

Usage

Arguments

Value