CountsToCPM

<p>Expression Set containing counts assay data.</p>

eset

<p>Convert counts data in Expression Set to counts per million (CPM)</p>

Provides tools to accurately estimate cell type abundances
from heterogeneous bulk expression. A reference-based method utilizes
single-cell information to generate a signature matrix and transformation
of bulk expression for accurate regression based estimates. A marker-based
method utilizes known cell-specific marker genes to measure relative
abundances across samples.
For more details, see Jew and Alvarez et al (2019) <doi:10.1101/669911>.

Brandon Jew

CountsToCPM: Convert counts data in Expression Set to counts per million (CPM)

Description

Usage

Arguments

Value