BoolFilter (version 1.0.0)

melanoma: Melanoma Regulatory Network

Description

Melanoma Boolean regulatory network as described by sM.R. Yousefi, et al.

Usage

data(melanoma)

Source

Yousefi, Mohammadmahdi R., and Edward R. Dougherty. "Intervention in gene regulatory networks with maximal phenotype alteration."" Bioinformatics 29.14 (2013): 1758-1767.

Details

The data consists of activities of 10 genes in melanoma regulatory network. The 10 genes are as follows: WNT5A, pirin, S100P, RET1, MMP3, PHOC, MART1, HADHB, synuclein, and STC2.

Examples

data(melanoma)

data <- simulateNetwork(melanoma, n.data = 100, p = .02,
                      obsModel = list(type = 'Bernoulli', 
                                      q = 0.05))