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BrainCon (version 0.3.0)

Inference the Partial Correlations Based on Time Series Data

Description

A statistical tool to inference the multi-level partial correlations based on multi-subject time series data, especially for brain functional connectivity. It combines both individual and population level inference by using the methods of Qiu and Zhou. (2021) and Genovese and Wasserman. (2006). It realizes two reliable estimation methods of partial correlation coefficients, using scaled lasso and lasso. It can be used to estimate individual- or population-level partial correlations, identify nonzero ones, and find out unequal partial correlation coefficients between two populations.

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Version

Install

install.packages('BrainCon')

Monthly Downloads

201

Version

0.3.0

License

GPL (>= 2)

Maintainer

Yunhaonan Yang

Last Published

May 22nd, 2023

Functions in BrainCon (0.3.0)

population.test.MinPv

The one-sample population inference using Genovese and Wasserman's method
popsimB

Simulation time series data for population B
individual.est

Estimate individual-level partial correlation coefficients
population.est

Estimate population-level partial correlation coefficients
individual.test

Identify nonzero individual-level partial correlations
population.test

The one-sample population inference
population2sample.test

Identify differences of partial correlations between two populations
population2sample.test.MinPv

Identify differences of partial correlations between two populations using Genovese and Wasserman's method
indsim

Simulation time series data for individual
popsimA

Simulation time series data for population A
tool

tool functions