exampleCAGEset


This is a <code><a rd-options="" href="/link/CAGEset?package=CAGEr&version=1.14.0" data-mini-rdoc="CAGEr::CAGEset">CAGEset</a></code> object that contains CAGE data for part of chromosome 13 from five different zebrafish (<em>Danio rerio</em>) samples. It is intended to be used as an input data in running examples from <code><a rd-options="" href="/link/CAGEr?package=CAGEr&version=1.14.0" data-mini-rdoc="CAGEr::CAGEr">CAGEr</a></code> package help pages.


datasets

Preprocessing of CAGE sequencing data, identification and normalization of transcription start sites and downstream analysis of transcription start sites clusters (promoters).

Vanja Haberle

CAGEr

Analysis of CAGE (Cap Analysis of Gene Expression) sequencing data for precise mapping of transcription start sites and promoterome mining

exampleCAGEset function

A <code><a rd-options="" href="/link/CAGEset?package=CAGEr&version=1.14.0" data-mini-rdoc="CAGEr::CAGEset">CAGEset</a></code> object

Format

This is a <code><a href="CAGEset" rd-options="">CAGEset</a></code> object that contains CAGE data for part of chromosome 13 from five different zebrafish (<em>Danio rerio</em>) samples. It is intended to be used as an input data in running examples from <code><a href="CAGEr" rd-options="">CAGEr</a></code> package help pages.

exampleCAGEset: Example CAGEset object with zebrafish CAGE data

Description

Usage

Arguments

Format