hungarian_Rcpp

costMat

<p>This is the Hungarian algorithm wrapper for cell type assignment
<code>hungarian_Rcpp</code> returns cell type assignment given reference GEPs</p>

Estimate cell-type-specific gene expression profiles and sample-specific cell-type proportions simultaneously using bulk sequencing data. Kang et al. (2019) <doi:10.1371/journal.pcbi.1007510>.

Kai Kang

CDSeq

A Complete Deconvolution Method using Sequencing Data

Caizhi Huang

Qian Meng

Igor Shats

Melissa Li

David Umbach

Leping Li

Yuanyuan Li

Xiaoling Li

hungarian_Rcpp function

This is the Hungarian algorithm wrapper for cell type assignment
<code>hungarian_Rcpp</code> returns cell type assignment given reference GEPs — hungarian_Rcpp

This is the Hungarian algorithm wrapper for cell type assignment
<code>hungarian_Rcpp</code> returns cell type assignment given reference GEPs

hungarian_Rcpp: This is the Hungarian algorithm wrapper for cell type assignment `hungarian_Rcpp` returns cell type assignment given reference GEPs

Description

Usage

Arguments

Value