mixtureGEP

<p>Synthetic bulk RNA-seq read counts data of six cell types</p>

Estimate cell-type-specific gene expression profiles and sample-specific cell-type proportions simultaneously using bulk sequencing data. Kang et al. (2019) <doi:10.1371/journal.pcbi.1007510>.

Kai Kang

CDSeq

A Complete Deconvolution Method using Sequencing Data

Caizhi Huang

Qian Meng

Igor Shats

Melissa Li

David Umbach

Leping Li

Yuanyuan Li

Xiaoling Li

mixtureGEP function

Format

Synthetic bulk RNA-seq read counts data of six cell types — mixtureGEP

Synthetic bulk RNA-seq read counts data of six cell types

mixtureGEP: Synthetic bulk RNA-seq read counts data of six cell types

Description

Usage

Arguments

Format