calculateGeneLFC

Log fold ratios of all sgRNAs of a gene are averaged to obtain the 
gene level log fold ratio.

Provides analytical methods for analyzing CRISPR screen data
at different levels of gene expression. Multi-component normal mixture models
and EM algorithms are used for modeling.

Lianbo Yu

CEDA

CRISPR Screen and Gene Expression Differential Analysis

Yue Zhao

Lang Li

calculateGeneLFC function

<dl><dt>lfcs</dt>
<dd>A numeric vector containing log fold change of sgRNAs.</dd>
<dt>genes</dt>
<dd>A character string containing gene names corresponding to sgRNAs.</dd></dl>

Arguments

Calculating gene-level log fold ratios — calculateGeneLFC

<dl>

<dt>lfcs</dt>
<dd>A numeric vector containing log fold change of sgRNAs.</dd>


<dt>genes</dt>
<dd>A character string containing gene names corresponding to sgRNAs.</dd>

</dl>

calculateGeneLFC: Calculating gene-level log fold ratios

Description

Usage

Value

Arguments