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CFAssay (version 1.6.0)

Statistical analysis for the Colony Formation Assay

Description

The package provides functions for calculation of linear-quadratic cell survival curves and for ANOVA of experimental 2-way designs along with the colony formation assay.

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Version

Version

1.6.0

License

LGPL

Maintainer

Herbert Braselmann

Last Published

February 15th, 2017

Functions in CFAssay (1.6.0)

pes

Calculation of plating efficiencies from a curve data set containing one specified curve
plotExp.cfa2way

Diagnostic plot of experimental replicates for two-way analysis of cell survival data
plot.cellsurvLQfit

Plot of an LQ model fit
plotExp

Generic plotting of experimental repeats
sfpmean

Pointwise mean survival fractions for curves with several experimental replicates
print.cellsurvLQdiff

Print test results of comparison of two linear-quadratic cell survival curves
cellsurvLQdiff

Comparison of two linear-quadratic cell survival curves
print.cellsurvLQfit

Print summary of an LQ-model fit for cell survival data
cellsurvLQfit

Fit the linear-quadratic (LQ) model to cell survival data
plotExp.cellsurvLQfit

Diagnostic plots of LQ model versus experiments
print.cfa2way

Print summary of two-way analysis for cell survival data.
cfa2way

Two-way analysis for cell survival data
plotExp.default

Default function for plotting of experimental repeats