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2.1.0
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Install
install.packages('CHNOSZ')
Monthly Downloads
1,258
Version
2.1.0
License
GPL-3
Homepage
https://www.chnosz.net/
Maintainer
Jeffrey Dick
Last Published
February 11th, 2024
Functions in CHNOSZ (2.1.0)
Search functions
NaCl
Simple NaCl-Water Solution
CHNOSZ-package
Thermodynamic Calculations and Diagrams for Geochemistry
add.protein
Amino Acid Compositions of Proteins
affinity
Chemical Affinities of Formation Reactions
add.OBIGT
Functions to Work with the Thermodynamic Database
IAPWS95
Properties of Water from IAPWS-95
basis
Define Basis Species
EOSregress
Regress Equations-of-State Parameters for Aqueous Species
makeup
Parse Chemical Formulas
info
Search the Thermodynamic Database
mix
Combine Diagrams for Multi-Metal Systems
logB.to.OBIGT
Fit Thermodynamic Parameters to Formation Constants (log β)
buffer
Calculating Buffered Chemical Activities
examples
Run Examples from the Documentation
extdata
Extra Data
ionize.aa
Properties of Ionization of Proteins
equilibrate
Equilibrium Chemical Activities of Species
diagram
Chemical Activity Diagrams
mosaic
Chemical Affinities with Changing Basis Species
solubility
Equilibrium Chemical Activities of Species
nonideal
Activity Coefficients of Aqueous Species
retrieve
Retrieve Species by Element
species
Species of Interest
subcrt
Properties of Species and Reactions
rank.affinity
Average Ranks of Chemical Affinities
protein.info
Summaries of Thermodynamic Properties of Proteins
palply
Conditional Parallel Processing
stack_mosaic
Stacked mosaic diagram
util.formula
Functions to Work with Chemical Formulas
thermo
Thermodynamic Database and System Settings
util.data
Functions for Checking Thermodynamic Data
taxonomy
Extract Data from NCBI Taxonomy Files
util.array
Functions to Work with Multidimensional Arrays
util.expression
Functions to Express Chemical Formulas and Properties
swap.basis
Swap Basis Species
util.legend
Functions to Make Legend Text
util.list
Functions to Work with Lists
util.fasta
Functions for Reading FASTA Files and Downloading from UniProt
util.seq
Functions to Work with Sequence Data
util.protein
Functions for Proteins (Other Calculations)
util.misc
Functions for Miscellaneous Tasks
util.units
Functions to Convert Units
water
Properties of Water
util.water
Functions for Properties of Water and Steam
util.plot
Functions to Create and Modify Plots
Berman
Thermodynamic Properties of Minerals
DEW
Deep Earth Water (DEW) Model