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CINNA (version 1.2.2)

Deciphering Central Informative Nodes in Network Analysis

Description

Computing, comparing, and demonstrating top informative centrality measures within a network. "CINNA: an R/CRAN package to decipher Central Informative Nodes in Network Analysis" provides a comprehensive overview of the package functionality Ashtiani et al. (2018) .

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Version

Install

install.packages('CINNA')

Monthly Downloads

1,083

Version

1.2.2

License

GPL-3

Maintainer

Minoo Ashtiani

Last Published

August 8th, 2023

Functions in CINNA (1.2.2)

tsne_centralities

t-Distributed Stochastic Neighbor Embedding (t-SNE) on centrality measures

summary_graph_extract_components

Summarize component extraction of a graph

summary_calculate_centralities

Summarize centrality measure calculation results

visualize_association

Pairwise association plot between centrality measures

Moreno Rhesus Network

proper_centralities

Proper centrality measure representation

summary_pca_centralities

Summarize PCA result related to centrality measures

summary_tsne_centralities

Summarize t-Distributed Stochastic Neighbor Embedding (t-SNE) on centrality measures

visualize_pair_correlation

Pairwise correlation plot between two centrality measures

visualize_correlations

Correlation plot between centrality measures

pca_centralities

PCA Centrality Measures

misc_extract_components

Component extraction of miscellaneous graph formats

Zachary Karate Club Network

wiener_index_centrality

Wiener Index Centrality

visualize_dendrogram

Dendrogram plot among centrality measures

visualize_heatmap

Heatmap plot between centrality measures

visualize_graph

Graph visualization based on a specific centrality measure

graph_extract_components

Component extraction of a graph

giant_component_extract

Giant component extraction of a graph

dangalchev_closeness_centrality

Dangalchev Closeness Centrality

harmonic_centrality

Harmonic Centrality

group_centrality

Group Centrality

calculate_centralities

Centrality measure calculation

local_bridging_centrality

Local Bridging Centrality

Kangaroo Network

Drug Target Network

Macaque Visual Cortex Network