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CLME (version 2.0-4)

Constrained Inference for Linear Mixed Effects Models

Description

Estimation and inference for linear models where some or all of the fixed-effects coefficients are subject to order restrictions. This package uses the robust residual bootstrap methodology for inference, and can handle some structure in the residual variance matrix.

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Version

Install

install.packages('CLME')

Monthly Downloads

206

Version

2.0-4

License

GPL-3

Maintainer

Casey M Jelsema

Last Published

July 13th, 2015

Functions in CLME (2.0-4)

is.clme

Constructor method for objects S3 class clme
clme_resids

Computes various types of residuals
lrt.stat

Likelihood ratio type statistic (global)
CLME-package

Constrained inference for linear mixed models.
clme

Constrained Inference for Linear Mixed Effects Models
random.effects

Extract random effects
fixef.clme

Extract fixed effects
fibroid

Fibroid Growth Study
logLik.clme

Log-likelihood
AIC.clme

Akaike information criterion
BIC.clme

Bayesian information criterion
VarCorr

Variance components
shiny_clme

Shiny GUI for CLME
confint.clme

Individual confidence intervals
print.varcorr_clme

Printout for variance components
print.clme

Printout of fitted object.
plot.summary.clme

S3 method to plot objects of class clme
summary.clme

Produce summary values for objects of class clme
nobs.clme

Number of observations
model.matrix.clme

Extract the model design matrix.
sigma.summary.clme

Residual variance components
rat.blood

Experiment on mice
model.frame.clme

Extracts the model frame
resid_boot

Obtain Residual Bootstrap
w.stat

Williams' Type Test Statistic.
ranef.clme

Extract random effects
plot.clme

S3 method to plot objects of class clme
clme_em_fixed

Constrained EM algorithm for linear fixed or mixed effects models.
model_terms_clme

Create model matrices for clme
formula.clme

Extract formula
sigma

Residual variance components
residuals.clme

Various types of residuals
minque

MINQUE Algorithm
print.summary.clme

S3 method to print a summary for objects of class clme
create.constraints

Generate common order constraints
sigma.clme

Residual variance components
vcov.clme

Variance-covariance matrix