cneMerge: CNE merge function

Description

Remove the CNEs which overlap on both genomes.

Usage

cneMerge(cne1, cne2)

Arguments

cne1, cne2

A object of data.frame. The result from ceScan.

Value

A data.frame of CNEs is returned. In this table, the order of columns are consistent with cne1. For instance, if cne1 has the first three columns for zebrafish and next three columns for human, in the merged table, the first three columns are still the coordinates for zebrafish while the next three columns are coordinates for human.

Examples

Run this code

data(CNEHg19DanRer7)
data(CNEDanRer7Hg19)
cneMergedDanRer7Hg19 = mapply(cneMerge, CNEDanRer7Hg19, CNEHg19DanRer7, 
                              SIMPLIFY=FALSE)

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