queryCNEData:
Query the CNEData package to fetch the CNEs
Description
Query the CNEData package to fetch the CNEs based on target, query species,
winSize and identity.
Usage
queryCNEData(dbName, target, query, winSize, identity, type=c("target", "all"))
Arguments
dbName
The path of SQLite database.
target, query
The CNEs between target and query species.
winSize, identity
The thresholds of CNEs to fetch on identity over winSize.
type
Which set of CNEs are returned. When it is "all",
the CNEs of target always on the left side of returned data.frame.
Value
A data.frame of CNEs coordinates in chr, start, end.