CNORdt (version 1.14.0)

modelPB: modelPB

Description

This data object contains the toy model from the package vignette, already loaded and formatted as a Model object.

Usage

Model

Format

modelPB is a list with fields "reacID" (character vector), "namesSpecies" (character vector), "interMat" (numerical matrix), and "notMat"(numerical matrix).

Source

This data and model is from the Physical Biology tutorial, "State-time spectrum of signal transduction logic models". It is used to demonstrate the assumptions and limitations of different logic model formalisms.

References

A. MacNamara, C. Terfve, D. Henriques, B. Penalver Bernabe and J. Saez-Rodriguez, 2012. State-time spectrum of signal transduction logic models. Physical biology, 9(4), p.045003.