ReadXLSXToList

filepath

rowNames

colNames


    Reads a list of read count matrices from a xlsx as generated
    by <code>WriteReadCountsToXLSX</code>


A method that allows for the use of a collection of non-matched
normal tissue samples. Our approach uses a non-parametric bootstrap
subsampling of the available reference samples to estimate the distribution
of read counts from targeted sequencing. As inspired by random forest, this
is combined with a procedure that subsamples the amplicons associated with
each of the targeted genes. The obtained information allows us to reliably
classify the copy number aberrations on the gene level.

Thomas Wolf

CNVPanelizer

Reliable CNV detection in targeted sequencing applications

ReadXLSXToList function

Reads a list of read count matrices from a xlsx as generated
    by <code>WriteReadCountsToXLSX</code>

ReadXLSXToList: ReadXLSXToList

Description

Usage

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Examples